Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Lmo4P61969 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Lmo4P61969 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Gm11509-201ENSMUST00000117358 325 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 Gm14724-201ENSMUST00000118400 537 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 Gm14247-201ENSMUST00000120950 237 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lmo4P61969 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Lmo4P61969 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
Lmo4P61969 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 Gm1821-202ENSMUST00000227415 750 ntBASIC9.94□□□□□ -0.82
Lmo4P61969 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lmo4P61969 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.94□□□□□ -0.82
Lmo4P61969 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lmo4P61969 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Lmo4P61969 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Gm15432-201ENSMUST00000121106 195 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.93□□□□□ -0.82
Lmo4P61969 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Gm23085-201ENSMUST00000157849 293 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Gm8100-201ENSMUST00000182906 988 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Gm37246-201ENSMUST00000192665 835 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.93□□□□□ -0.82
Lmo4P61969 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.93□□□□□ -0.82
Lmo4P61969 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.93□□□□□ -0.82
Lmo4P61969 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lmo4P61969 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Lmo4P61969 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms