Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vbp1P61759 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vbp1P61759 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vbp1P61759 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vbp1P61759 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vbp1P61759 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vbp1P61759 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Vbp1P61759 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vbp1P61759 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.16□□□□□ -0.62
Vbp1P61759 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.16□□□□□ -0.62
Vbp1P61759 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vbp1P61759 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.16□□□□□ -0.62
Vbp1P61759 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.16□□□□□ -0.62
Vbp1P61759 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Gm18733-201ENSMUST00000173950 856 ntBASIC11.16□□□□□ -0.62
Vbp1P61759 Gm42550-201ENSMUST00000201553 960 ntBASIC11.16□□□□□ -0.62
Vbp1P61759 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.16□□□□□ -0.62
Vbp1P61759 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Vbp1P61759 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vbp1P61759 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Vbp1P61759 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vbp1P61759 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.16□□□□□ -0.62
Vbp1P61759 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.15□□□□□ -0.62
Vbp1P61759 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.15□□□□□ -0.62
Vbp1P61759 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Vbp1P61759 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Gm44335-201ENSMUST00000196879 141 ntBASIC11.15□□□□□ -0.62
Vbp1P61759 Gm44297-201ENSMUST00000198304 141 ntBASIC11.15□□□□□ -0.62
Vbp1P61759 Gm44346-201ENSMUST00000198851 141 ntBASIC11.15□□□□□ -0.62
Vbp1P61759 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.15□□□□□ -0.62
Vbp1P61759 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.15□□□□□ -0.62
Vbp1P61759 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.15□□□□□ -0.62
Vbp1P61759 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Vbp1P61759 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Vbp1P61759 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vbp1P61759 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.15□□□□□ -0.63
Vbp1P61759 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Vbp1P61759 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vbp1P61759 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vbp1P61759 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.15□□□□□ -0.63
Vbp1P61759 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vbp1P61759 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vbp1P61759 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms