Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SqleP52019 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SqleP52019 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SqleP52019 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.36□□□□□ -0.27
SqleP52019 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Gm24231-201ENSMUST00000104315 133 ntBASIC13.36□□□□□ -0.27
SqleP52019 Gm8731-201ENSMUST00000118088 412 ntBASIC13.36□□□□□ -0.27
SqleP52019 Gm14942-201ENSMUST00000119642 336 ntBASIC13.36□□□□□ -0.27
SqleP52019 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.36□□□□□ -0.27
SqleP52019 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.36□□□□□ -0.27
SqleP52019 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SqleP52019 Gm8451-201ENSMUST00000170338 447 ntBASIC13.36□□□□□ -0.27
SqleP52019 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.36□□□□□ -0.27
SqleP52019 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.36□□□□□ -0.27
SqleP52019 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.36□□□□□ -0.27
SqleP52019 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.36□□□□□ -0.27
SqleP52019 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.36□□□□□ -0.27
SqleP52019 Gm4604-201ENSMUST00000025040 390 ntBASIC13.36□□□□□ -0.27
SqleP52019 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SqleP52019 Gm7536-201ENSMUST00000077389 444 ntBASIC13.36□□□□□ -0.27
SqleP52019 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Gm5453-201ENSMUST00000080866 447 ntBASIC13.36□□□□□ -0.27
SqleP52019 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SqleP52019 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.36□□□□□ -0.27
SqleP52019 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SqleP52019 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SqleP52019 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SqleP52019 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Gm25076-201ENSMUST00000104098 132 ntBASIC13.35□□□□□ -0.27
SqleP52019 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Gm12943-201ENSMUST00000119616 210 ntBASIC13.35□□□□□ -0.27
SqleP52019 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.35□□□□□ -0.27
SqleP52019 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.35□□□□□ -0.27
SqleP52019 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Gm43610-201ENSMUST00000199117 365 ntBASIC13.35□□□□□ -0.27
SqleP52019 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.35□□□□□ -0.27
SqleP52019 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Gm5805-201ENSMUST00000072779 456 ntBASIC13.35□□□□□ -0.27
SqleP52019 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.35□□□□□ -0.27
SqleP52019 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.35□□□□□ -0.27
SqleP52019 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SqleP52019 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SqleP52019 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SqleP52019 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.34□□□□□ -0.27
SqleP52019 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SqleP52019 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SqleP52019 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SqleP52019 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
SqleP52019 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SqleP52019 Gm14274-201ENSMUST00000117182 615 ntBASIC13.34□□□□□ -0.27
SqleP52019 Gm12218-201ENSMUST00000117666 399 ntBASIC13.34□□□□□ -0.27
SqleP52019 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SqleP52019 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms