Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.47□□□□□ -0.41
Lhx3P50481 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.47□□□□□ -0.41
Lhx3P50481 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.47□□□□□ -0.41
Lhx3P50481 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lhx3P50481 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.47□□□□□ -0.41
Lhx3P50481 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lhx3P50481 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lhx3P50481 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Gm12164-201ENSMUST00000121695 551 ntBASIC12.46□□□□□ -0.41
Lhx3P50481 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lhx3P50481 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Gm37666-201ENSMUST00000194110 866 ntBASIC12.46□□□□□ -0.41
Lhx3P50481 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.46□□□□□ -0.41
Lhx3P50481 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Gm17812-201ENSMUST00000204935 318 ntBASIC12.46□□□□□ -0.41
Lhx3P50481 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.46□□□□□ -0.41
Lhx3P50481 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
Lhx3P50481 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.46□□□□□ -0.41
Lhx3P50481 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lhx3P50481 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lhx3P50481 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lhx3P50481 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.46□□□□□ -0.42
Lhx3P50481 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.46□□□□□ -0.42
Lhx3P50481 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lhx3P50481 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lhx3P50481 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lhx3P50481 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.46□□□□□ -0.42
Lhx3P50481 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.45□□□□□ -0.42
Lhx3P50481 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lhx3P50481 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm14208-201ENSMUST00000119645 678 ntBASIC12.45□□□□□ -0.42
Lhx3P50481 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.45□□□□□ -0.42
Lhx3P50481 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lhx3P50481 Gm7003-201ENSMUST00000195089 312 ntBASIC12.45□□□□□ -0.42
Lhx3P50481 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.45□□□□□ -0.42
Lhx3P50481 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.45□□□□□ -0.42
Lhx3P50481 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms