Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.68□□□□□ -0.54
Nkx2-6P43688 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx2-6P43688 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm18734-201ENSMUST00000172937 808 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm29615-201ENSMUST00000185371 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28224-201ENSMUST00000186078 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm29001-201ENSMUST00000186177 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28292-201ENSMUST00000186593 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28101-201ENSMUST00000187608 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm29076-201ENSMUST00000187689 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28302-201ENSMUST00000187931 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28646-201ENSMUST00000188220 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28205-201ENSMUST00000189177 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm29032-201ENSMUST00000189797 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm28695-201ENSMUST00000190300 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm37448-201ENSMUST00000192795 697 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.67□□□□□ -0.54
Nkx2-6P43688 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx2-6P43688 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx2-6P43688 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Nkx2-6P43688 Gm14263-201ENSMUST00000117955 746 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms