Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.29□□□□□ -0.44
LdlrP35951 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LdlrP35951 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LdlrP35951 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.28□□□□□ -0.44
LdlrP35951 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.28□□□□□ -0.44
LdlrP35951 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Gm17208-201ENSMUST00000168388 535 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Gm38341-201ENSMUST00000195357 515 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.28□□□□□ -0.44
LdlrP35951 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.28□□□□□ -0.44
LdlrP35951 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Cts7-204ENSMUST00000225321 1257 ntBASIC12.28□□□□□ -0.44
LdlrP35951 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LdlrP35951 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.28□□□□□ -0.44
LdlrP35951 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.28□□□□□ -0.44
LdlrP35951 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LdlrP35951 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LdlrP35951 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.27□□□□□ -0.44
LdlrP35951 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LdlrP35951 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.27□□□□□ -0.44
LdlrP35951 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LdlrP35951 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.27□□□□□ -0.45
LdlrP35951 Gm11637-201ENSMUST00000120601 592 ntBASIC12.27□□□□□ -0.45
LdlrP35951 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.27□□□□□ -0.45
LdlrP35951 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LdlrP35951 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Gm37922-201ENSMUST00000195596 455 ntBASIC12.27□□□□□ -0.45
LdlrP35951 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.27□□□□□ -0.45
LdlrP35951 Gm18935-201ENSMUST00000212692 664 ntBASIC12.27□□□□□ -0.45
LdlrP35951 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.27□□□□□ -0.45
LdlrP35951 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.27□□□□□ -0.45
LdlrP35951 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
LdlrP35951 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LdlrP35951 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.27□□□□□ -0.45
LdlrP35951 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.27□□□□□ -0.45
LdlrP35951 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LdlrP35951 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LdlrP35951 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LdlrP35951 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LdlrP35951 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LdlrP35951 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms