Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.62□□□□□ -0.39
Mmp13P33435 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.62□□□□□ -0.39
Mmp13P33435 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mmp13P33435 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.62□□□□□ -0.39
Mmp13P33435 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.62□□□□□ -0.39
Mmp13P33435 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mmp13P33435 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mmp13P33435 Gm23931-201ENSMUST00000103842 109 ntBASIC12.62□□□□□ -0.39
Mmp13P33435 Gm12363-201ENSMUST00000122250 668 ntBASIC12.62□□□□□ -0.39
Mmp13P33435 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.62□□□□□ -0.39
Mmp13P33435 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.62□□□□□ -0.39
Mmp13P33435 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.62□□□□□ -0.39
Mmp13P33435 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Mmp13P33435 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Snora73a-201ENSMUST00000082453 205 ntBASIC12.62□□□□□ -0.39
Mmp13P33435 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Mmp13P33435 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp13P33435 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.61□□□□□ -0.39
Mmp13P33435 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.61□□□□□ -0.39
Mmp13P33435 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.61□□□□□ -0.39
Mmp13P33435 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.61□□□□□ -0.39
Mmp13P33435 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Mmp13P33435 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Gm42599-201ENSMUST00000201308 469 ntBASIC12.61□□□□□ -0.39
Mmp13P33435 Gm6013-201ENSMUST00000212264 699 ntBASIC12.61□□□□□ -0.39
Mmp13P33435 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.61□□□□□ -0.39
Mmp13P33435 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp13P33435 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp13P33435 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp13P33435 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp13P33435 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp13P33435 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp13P33435 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp13P33435 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms