Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm18304-201ENSMUST00000189162 546 ntBASIC11.2□□□□□ -0.62
VtnP29788 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.2□□□□□ -0.62
VtnP29788 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
VtnP29788 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
VtnP29788 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
VtnP29788 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VtnP29788 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.2□□□□□ -0.62
VtnP29788 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.2□□□□□ -0.62
VtnP29788 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VtnP29788 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VtnP29788 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
VtnP29788 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.19□□□□□ -0.62
VtnP29788 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.19□□□□□ -0.62
VtnP29788 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
VtnP29788 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.19□□□□□ -0.62
VtnP29788 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.19□□□□□ -0.62
VtnP29788 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm13570-201ENSMUST00000140763 309 ntBASIC11.19□□□□□ -0.62
VtnP29788 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.19□□□□□ -0.62
VtnP29788 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.19□□□□□ -0.62
VtnP29788 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.19□□□□□ -0.62
VtnP29788 Gm26956-201ENSMUST00000182176 986 ntBASIC11.19□□□□□ -0.62
VtnP29788 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.19□□□□□ -0.62
VtnP29788 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VtnP29788 Gm5950-201ENSMUST00000213337 772 ntBASIC11.19□□□□□ -0.62
VtnP29788 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.19□□□□□ -0.62
VtnP29788 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.19□□□□□ -0.62
VtnP29788 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.19□□□□□ -0.62
VtnP29788 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.19□□□□□ -0.62
VtnP29788 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VtnP29788 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VtnP29788 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.18□□□□□ -0.62
VtnP29788 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.18□□□□□ -0.62
VtnP29788 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm23270-201ENSMUST00000104055 131 ntBASIC11.18□□□□□ -0.62
VtnP29788 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.18□□□□□ -0.62
VtnP29788 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VtnP29788 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.18□□□□□ -0.62
VtnP29788 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.18□□□□□ -0.62
VtnP29788 Mir5132-201ENSMUST00000175166 71 ntBASIC11.18□□□□□ -0.62
VtnP29788 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.18□□□□□ -0.62
VtnP29788 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VtnP29788 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms