Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.35□□□□□ -0.59
Nedd8P29595 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Nedd8P29595 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Gm43094-201ENSMUST00000196549 921 ntBASIC11.35□□□□□ -0.59
Nedd8P29595 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.35□□□□□ -0.59
Nedd8P29595 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Gm10175-201ENSMUST00000086013 645 ntBASIC11.35□□□□□ -0.59
Nedd8P29595 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Nedd8P29595 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Nedd8P29595 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nedd8P29595 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Gm26464-201ENSMUST00000157094 305 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Gm43474-201ENSMUST00000196415 774 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Gm42550-201ENSMUST00000201553 960 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Gm5312-201ENSMUST00000203728 547 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.34□□□□□ -0.59
Nedd8P29595 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.34□□□□□ -0.59
Nedd8P29595 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nedd8P29595 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.34□□□□□ -0.59
Nedd8P29595 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nedd8P29595 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.33□□□□□ -0.59
Nedd8P29595 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Nedd8P29595 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nedd8P29595 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Nedd8P29595 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.33□□□□□ -0.6
Nedd8P29595 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm18733-201ENSMUST00000173950 856 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nedd8P29595 Gm44335-201ENSMUST00000196879 141 ntBASIC11.33□□□□□ -0.6
Nedd8P29595 Gm44297-201ENSMUST00000198304 141 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms