Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.87□□□□□ -0.67
Ccl3P10855 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl3P10855 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl3P10855 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Ccl3P10855 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl3P10855 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm11663-201ENSMUST00000117888 290 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl3P10855 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.86□□□□□ -0.67
Ccl3P10855 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.86□□□□□ -0.67
Ccl3P10855 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ccl3P10855 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Ccl3P10855 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm9463-201ENSMUST00000206707 601 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 Gm9797-202ENSMUST00000218003 294 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccl3P10855 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccl3P10855 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ccl3P10855 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.86□□□□□ -0.67
Ccl3P10855 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl3P10855 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm23912-201ENSMUST00000104687 87 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm12164-201ENSMUST00000121695 551 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Gm4726-201ENSMUST00000135604 736 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Gm6019-201ENSMUST00000148369 736 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Gm22144-201ENSMUST00000157402 102 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.85□□□□□ -0.67
Ccl3P10855 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm17831-201ENSMUST00000205579 900 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.85□□□□□ -0.67
Ccl3P10855 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl3P10855 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Matn2-206ENSMUST00000228570 2798 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl3P10855 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Grk6-205ENSMUST00000224653 2976 ntBASIC10.85□□□□□ -0.67
Ccl3P10855 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccl3P10855 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl3P10855 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl3P10855 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms