Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.67□□□□□ -0.54
ApoeP08226 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
ApoeP08226 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.66□□□□□ -0.54
ApoeP08226 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Gm8213-201ENSMUST00000118191 441 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm8598-201ENSMUST00000221184 836 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm24526-201ENSMUST00000082921 158 ntBASIC11.66□□□□□ -0.54
ApoeP08226 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
ApoeP08226 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ApoeP08226 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ApoeP08226 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.65□□□□□ -0.54
ApoeP08226 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ApoeP08226 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
ApoeP08226 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
ApoeP08226 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ApoeP08226 Gm13612-201ENSMUST00000119276 390 ntBASIC11.65□□□□□ -0.54
ApoeP08226 Gm10156-201ENSMUST00000122364 462 ntBASIC11.65□□□□□ -0.54
ApoeP08226 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.65□□□□□ -0.54
ApoeP08226 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.65□□□□□ -0.54
ApoeP08226 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.65□□□□□ -0.54
ApoeP08226 Proscos-202ENSMUST00000178990 666 ntBASIC11.65□□□□□ -0.54
ApoeP08226 Gm9022-201ENSMUST00000182482 992 ntBASIC11.65□□□□□ -0.54
ApoeP08226 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.65□□□□□ -0.54
ApoeP08226 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.65□□□□□ -0.54
ApoeP08226 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.65□□□□□ -0.54
ApoeP08226 Gm8463-201ENSMUST00000208573 613 ntBASIC11.65□□□□□ -0.54
ApoeP08226 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.65□□□□□ -0.54
ApoeP08226 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.65□□□□□ -0.54
ApoeP08226 Gm18624-201ENSMUST00000220966 658 ntBASIC11.65□□□□□ -0.54
ApoeP08226 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.65□□□□□ -0.54
ApoeP08226 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ApoeP08226 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
ApoeP08226 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ApoeP08226 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.65□□□□□ -0.55
ApoeP08226 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ApoeP08226 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.65□□□□□ -0.55
ApoeP08226 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
ApoeP08226 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ApoeP08226 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ApoeP08226 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
ApoeP08226 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
ApoeP08226 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms