Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.5□□□□□ -0.41
PdgfrbP05622 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PdgfrbP05622 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PdgfrbP05622 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm15370-201ENSMUST00000117158 253 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm13786-201ENSMUST00000122371 333 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm29396-201ENSMUST00000185659 716 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
PdgfrbP05622 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PdgfrbP05622 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm13183-201ENSMUST00000118615 789 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm13570-201ENSMUST00000140763 309 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm25043-201ENSMUST00000158604 212 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm8502-201ENSMUST00000185708 901 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm21147-201ENSMUST00000186046 913 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm8510-201ENSMUST00000189202 895 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm2316-201ENSMUST00000190613 921 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm42693-201ENSMUST00000196779 631 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Gm42937-201ENSMUST00000197360 752 ntBASIC12.48□□□□□ -0.41
PdgfrbP05622 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
PdgfrbP05622 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PdgfrbP05622 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms