Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igh-VJ558P01758 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.65□□□□□ -0.71
Igh-VJ558P01758 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm23912-201ENSMUST00000104687 87 ntBASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm42627-201ENSMUST00000197347 224 ntBASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igh-VJ558P01758 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm4986-201ENSMUST00000119731 549 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm13297-201ENSMUST00000120205 934 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm29396-201ENSMUST00000185659 716 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Olfr284-202ENSMUST00000206647 966 ntBASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Igh-VJ558P01758 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igh-VJ558P01758 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Igh-VJ558P01758 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Igh-VJ558P01758 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms