Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Vti1aO89116 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Gm13296-201ENSMUST00000117854 997 ntBASIC13.34□□□□□ -0.27
Vti1aO89116 Gm14999-201ENSMUST00000121039 624 ntBASIC13.34□□□□□ -0.27
Vti1aO89116 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.34□□□□□ -0.27
Vti1aO89116 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.34□□□□□ -0.27
Vti1aO89116 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Vti1aO89116 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vti1aO89116 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vti1aO89116 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vti1aO89116 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Vti1aO89116 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.33□□□□□ -0.27
Vti1aO89116 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vti1aO89116 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.33□□□□□ -0.28
Vti1aO89116 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Vti1aO89116 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
Vti1aO89116 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Gm37986-201ENSMUST00000193285 383 ntBASIC13.33□□□□□ -0.28
Vti1aO89116 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.33□□□□□ -0.28
Vti1aO89116 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vti1aO89116 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.33□□□□□ -0.28
Vti1aO89116 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vti1aO89116 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vti1aO89116 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Vti1aO89116 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.32□□□□□ -0.28
Vti1aO89116 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm8018-201ENSMUST00000173536 789 ntBASIC13.32□□□□□ -0.28
Vti1aO89116 Gm5070-201ENSMUST00000177599 862 ntBASIC13.32□□□□□ -0.28
Vti1aO89116 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm43378-201ENSMUST00000199336 582 ntBASIC13.32□□□□□ -0.28
Vti1aO89116 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Vti1aO89116 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.32□□□□□ -0.28
Vti1aO89116 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.32□□□□□ -0.28
Vti1aO89116 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vti1aO89116 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms