Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Itgb3O54890 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Itgb3O54890 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.06□□□□□ -0.32
Itgb3O54890 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.06□□□□□ -0.32
Itgb3O54890 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm8913-201ENSMUST00000209491 641 ntBASIC13.06□□□□□ -0.32
Itgb3O54890 Gm18212-201ENSMUST00000211678 889 ntBASIC13.06□□□□□ -0.32
Itgb3O54890 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Itgb3O54890 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Itgb3O54890 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.06□□□□□ -0.32
Itgb3O54890 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.06□□□□□ -0.32
Itgb3O54890 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Itgb3O54890 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Itgb3O54890 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.05□□□□□ -0.32
Itgb3O54890 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.05□□□□□ -0.32
Itgb3O54890 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Itgb3O54890 Gm24990-201ENSMUST00000157406 323 ntBASIC13.05□□□□□ -0.32
Itgb3O54890 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Itgb3O54890 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.05□□□□□ -0.32
Itgb3O54890 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.05□□□□□ -0.32
Itgb3O54890 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.05□□□□□ -0.32
Itgb3O54890 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Itgb3O54890 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.05□□□□□ -0.32
Itgb3O54890 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms