Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.03□□□□□ -0.48
Atn1O35126 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.03□□□□□ -0.48
Atn1O35126 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atn1O35126 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atn1O35126 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atn1O35126 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atn1O35126 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atn1O35126 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Atn1O35126 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Atn1O35126 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.02□□□□□ -0.49
Atn1O35126 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Atn1O35126 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.02□□□□□ -0.49
Atn1O35126 Gm11591-201ENSMUST00000120063 702 ntBASIC12.02□□□□□ -0.49
Atn1O35126 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.02□□□□□ -0.49
Atn1O35126 Gm1335-201ENSMUST00000121653 386 ntBASIC12.02□□□□□ -0.49
Atn1O35126 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.02□□□□□ -0.49
Atn1O35126 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.02□□□□□ -0.49
Atn1O35126 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Gm18304-201ENSMUST00000189162 546 ntBASIC12.02□□□□□ -0.49
Atn1O35126 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.02□□□□□ -0.49
Atn1O35126 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Atn1O35126 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atn1O35126 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Atn1O35126 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.02□□□□□ -0.49
Atn1O35126 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atn1O35126 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Atn1O35126 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.02□□□□□ -0.49
Atn1O35126 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atn1O35126 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.01□□□□□ -0.49
Atn1O35126 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Atn1O35126 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Atn1O35126 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Gm42599-201ENSMUST00000201308 469 ntBASIC12.01□□□□□ -0.49
Atn1O35126 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.01□□□□□ -0.49
Atn1O35126 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.01□□□□□ -0.49
Atn1O35126 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.01□□□□□ -0.49
Atn1O35126 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atn1O35126 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.01□□□□□ -0.49
Atn1O35126 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Atn1O35126 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atn1O35126 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12□□□□□ -0.49
Atn1O35126 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atn1O35126 Ptprm-203ENSMUST00000224091 3773 ntBASIC12□□□□□ -0.49
Atn1O35126 Gm43321-201ENSMUST00000198897 2409 ntBASIC12□□□□□ -0.49
Atn1O35126 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Atn1O35126 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12□□□□□ -0.49
Atn1O35126 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atn1O35126 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atn1O35126 Gm10728-201ENSMUST00000194292 1829 ntBASIC12□□□□□ -0.49
Atn1O35126 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atn1O35126 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Atn1O35126 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms