Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.73□□□□□ -0.21
B020004C17RikJ3QP07 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm6485-201ENSMUST00000160676 439 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm4310-201ENSMUST00000177847 889 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm4654-201ENSMUST00000183305 982 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm2553-201ENSMUST00000215986 605 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
B020004C17RikJ3QP07 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
B020004C17RikJ3QP07 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
B020004C17RikJ3QP07 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
B020004C17RikJ3QP07 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms