Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm12036-201ENSMUST00000120008 530 ntBASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm14441-201ENSMUST00000121960 540 ntBASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm8492-201ENSMUST00000182375 987 ntBASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm28388-201ENSMUST00000186262 437 ntBASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcf11G3X9Z4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm14193-201ENSMUST00000105067 153 ntBASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm11783-201ENSMUST00000119549 885 ntBASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm44158-201ENSMUST00000203881 505 ntBASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm45484-201ENSMUST00000210310 1141 ntBASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Gm26616-202ENSMUST00000195676 3107 ntBASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcf11G3X9Z4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Gm8342-201ENSMUST00000209839 757 ntBASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Pcf11G3X9Z4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcf11G3X9Z4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcf11G3X9Z4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcf11G3X9Z4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcf11G3X9Z4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcf11G3X9Z4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Gm6114-201ENSMUST00000182472 968 ntBASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Gm6450-201ENSMUST00000200896 574 ntBASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Gm44506-201ENSMUST00000206278 965 ntBASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcf11G3X9Z4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms