Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hfm1D3Z4R1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm6189-201ENSMUST00000164487 2082 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm4900-201ENSMUST00000222046 1628 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm44056-201ENSMUST00000204623 1427 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm14892-201ENSMUST00000117636 267 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm12948-201ENSMUST00000119406 682 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm9089-201ENSMUST00000122027 526 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm18201-201ENSMUST00000174735 875 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm26989-201ENSMUST00000182608 749 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Lgi3-203ENSMUST00000226548 1001 ntBASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hfm1D3Z4R1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Gm6655-201ENSMUST00000201932 1309 ntBASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hfm1D3Z4R1 Gm43447-201ENSMUST00000198471 1535 ntBASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Gm19587-201ENSMUST00000191395 545 ntBASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Gm18706-201ENSMUST00000210053 1066 ntBASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Gm18514-201ENSMUST00000218980 436 ntBASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Gm23105-201ENSMUST00000083719 134 ntBASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hfm1D3Z4R1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Gm13117-201ENSMUST00000120894 691 ntBASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Gm11244-201ENSMUST00000121243 237 ntBASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Gm6450-201ENSMUST00000200896 574 ntBASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 AC114645.1-201ENSMUST00000215831 187 ntBASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hfm1D3Z4R1 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms