Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm12363-201ENSMUST00000122250 668 ntBASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
H2afb3S4R1G7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm11478-201ENSMUST00000117851 599 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm12490-201ENSMUST00000120255 560 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Gm32025-201ENSMUST00000217960 307 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
H2afb3S4R1G7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms