Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm13736-201ENSMUST00000119272 253 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm14726-201ENSMUST00000120623 896 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm8018-201ENSMUST00000173536 789 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm44405-201ENSMUST00000198952 126 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm5950-201ENSMUST00000213337 772 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clcf1Q9QZM3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Gm12058-201ENSMUST00000118614 437 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Gm17376-201ENSMUST00000166016 84 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Clcf1Q9QZM3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms