Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Gm27459-201ENSMUST00000184860 107 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Gm27628-201ENSMUST00000184911 107 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Birc2-201ENSMUST00000054878 378 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gm10576-201ENSMUST00000191927 825 ntBASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gm38225-201ENSMUST00000194001 393 ntBASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco4Q9JIS3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.84
Smco4Q9JIS3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm11439-201ENSMUST00000118598 409 ntBASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Smco4Q9JIS3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms