Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chaf1bQ9D0N7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chaf1bQ9D0N7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.58□□□□□ -0.55
Chaf1bQ9D0N7 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chaf1bQ9D0N7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Gm13123-201ENSMUST00000122173 492 ntBASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Chaf1bQ9D0N7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Gm12928-201ENSMUST00000117115 573 ntBASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Gm17208-201ENSMUST00000168388 535 ntBASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Gm37917-201ENSMUST00000194711 392 ntBASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Gm20949-201ENSMUST00000206478 952 ntBASIC11.57□□□□□ -0.56
Chaf1bQ9D0N7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms