Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ssu72Q9CY97 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ssu72Q9CY97 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.24□□□□□ -0.45
Ssu72Q9CY97 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gm44958-201ENSMUST00000203734 736 ntBASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.24□□□□□ -0.45
Ssu72Q9CY97 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Gm25007-201ENSMUST00000083808 133 ntBASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ssu72Q9CY97 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm12314-201ENSMUST00000118104 538 ntBASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm13369-201ENSMUST00000119442 987 ntBASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssu72Q9CY97 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms