Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gm11511-201ENSMUST00000118146 540 ntBASIC15.2■□□□□ 0.02
Trim34aQ99PP6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gm8100-201ENSMUST00000182906 988 ntBASIC15.2■□□□□ 0.02
Trim34aQ99PP6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.2■□□□□ 0.02
Trim34aQ99PP6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Ginm1-202ENSMUST00000065124 300 ntBASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gm10179-201ENSMUST00000086233 688 ntBASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm12857-201ENSMUST00000117678 592 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm14724-201ENSMUST00000118400 537 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm14665-201ENSMUST00000122294 557 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm2965-201ENSMUST00000198365 343 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm44545-201ENSMUST00000208262 746 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim34aQ99PP6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Gm26286-201ENSMUST00000104166 134 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Gm23912-201ENSMUST00000104687 87 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Gm10288-201ENSMUST00000084614 537 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim34aQ99PP6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms