Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm7082-201ENSMUST00000209880 969 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm24279-201ENSMUST00000104236 131 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm13981-201ENSMUST00000122360 447 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm2345-201ENSMUST00000193451 589 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm14270-201ENSMUST00000118388 846 ntBASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm7150-201ENSMUST00000122032 981 ntBASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm45094-201ENSMUST00000207013 617 ntBASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm17944-201ENSMUST00000186351 643 ntBASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Gm30671-201ENSMUST00000214898 318 ntBASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdh23Q99PF4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm14892-201ENSMUST00000117636 267 ntBASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm11244-201ENSMUST00000121243 237 ntBASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.21□□□□□ -0.46
Cdh23Q99PF4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.21□□□□□ -0.46
Cdh23Q99PF4 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm11957-201ENSMUST00000118304 779 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm15207-201ENSMUST00000119259 442 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh23Q99PF4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms