Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm4986-201ENSMUST00000119731 549 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm13342-201ENSMUST00000121055 207 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm5904-201ENSMUST00000210286 865 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Cts7-204ENSMUST00000225321 1257 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.04□□□□□ -0.48
Msh4Q99MT2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msh4Q99MT2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm13297-201ENSMUST00000120205 934 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm13316-201ENSMUST00000140537 691 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.03□□□□□ -0.48
Msh4Q99MT2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms