Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.03□□□□□ -0.32
Usp11Q99K46 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.03□□□□□ -0.32
Usp11Q99K46 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.03□□□□□ -0.32
Usp11Q99K46 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Usp11Q99K46 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.03□□□□□ -0.32
Usp11Q99K46 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp11Q99K46 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Usp11Q99K46 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Usp11Q99K46 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp11Q99K46 Gm22018-201ENSMUST00000104357 131 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm13392-201ENSMUST00000117708 150 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm17420-201ENSMUST00000164753 153 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm23363-201ENSMUST00000175024 79 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.02□□□□□ -0.33
Usp11Q99K46 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm37008-201ENSMUST00000195712 319 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm19184-201ENSMUST00000196798 928 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.02□□□□□ -0.33
Usp11Q99K46 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp11Q99K46 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp11Q99K46 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp11Q99K46 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.01□□□□□ -0.33
Usp11Q99K46 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm14921-201ENSMUST00000118643 908 ntBASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm7809-201ENSMUST00000153199 742 ntBASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.01□□□□□ -0.33
Usp11Q99K46 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.01□□□□□ -0.33
Usp11Q99K46 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm19309-201ENSMUST00000218295 205 ntBASIC13.01□□□□□ -0.33
Usp11Q99K46 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.01□□□□□ -0.33
Usp11Q99K46 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp11Q99K46 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms