Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm8194-201ENSMUST00000159783 859 ntBASIC14.22□□□□□ -0.13
Rfc4Q99J62 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.22□□□□□ -0.13
Rfc4Q99J62 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Gm807-202ENSMUST00000224929 408 ntBASIC14.22□□□□□ -0.13
Rfc4Q99J62 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc4Q99J62 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.22□□□□□ -0.13
Rfc4Q99J62 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Gm3332-201ENSMUST00000189337 928 ntBASIC14.21□□□□□ -0.13
Rfc4Q99J62 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.21□□□□□ -0.13
Rfc4Q99J62 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfc4Q99J62 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc4Q99J62 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc4Q99J62 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.21□□□□□ -0.14
Rfc4Q99J62 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Rfc4Q99J62 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rfc4Q99J62 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Mir6546-201ENSMUST00000184460 62 ntBASIC14.2□□□□□ -0.14
Rfc4Q99J62 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.2□□□□□ -0.14
Rfc4Q99J62 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms