Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.25□□□□□ -0.45
Vsx1Q91V10 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.25□□□□□ -0.45
Vsx1Q91V10 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.24□□□□□ -0.45
Vsx1Q91V10 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.24□□□□□ -0.45
Vsx1Q91V10 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.24□□□□□ -0.45
Vsx1Q91V10 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.24□□□□□ -0.45
Vsx1Q91V10 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.24□□□□□ -0.45
Vsx1Q91V10 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.24□□□□□ -0.45
Vsx1Q91V10 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.24□□□□□ -0.45
Vsx1Q91V10 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm12291-201ENSMUST00000121627 311 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.23□□□□□ -0.45
Vsx1Q91V10 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vsx1Q91V10 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gm7851-201ENSMUST00000117574 323 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gm8492-201ENSMUST00000182375 987 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms