Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tram1Q91V04 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Tram1Q91V04 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Tram1Q91V04 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Tram1Q91V04 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Tram1Q91V04 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm24231-201ENSMUST00000104315 133 ntBASIC10.62□□□□□ -0.71
Tram1Q91V04 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.62□□□□□ -0.71
Tram1Q91V04 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Tram1Q91V04 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.62□□□□□ -0.71
Tram1Q91V04 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.62□□□□□ -0.71
Tram1Q91V04 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.62□□□□□ -0.71
Tram1Q91V04 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.62□□□□□ -0.71
Tram1Q91V04 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.62□□□□□ -0.71
Tram1Q91V04 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.62□□□□□ -0.71
Tram1Q91V04 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tram1Q91V04 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm14704-201ENSMUST00000120300 874 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm14822-201ENSMUST00000122247 291 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm28760-201ENSMUST00000185995 736 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.61□□□□□ -0.71
Tram1Q91V04 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.61□□□□□ -0.71
Tram1Q91V04 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tram1Q91V04 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms