Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim60Q8VI40 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim60Q8VI40 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim60Q8VI40 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim60Q8VI40 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim60Q8VI40 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim60Q8VI40 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim60Q8VI40 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.77□□□□□ -0.37
Trim60Q8VI40 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.37
Trim60Q8VI40 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim60Q8VI40 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.77□□□□□ -0.37
Trim60Q8VI40 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim60Q8VI40 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.76□□□□□ -0.37
Trim60Q8VI40 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm27839-201ENSMUST00000184242 106 ntBASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.76□□□□□ -0.37
Trim60Q8VI40 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm10268-201ENSMUST00000085340 555 ntBASIC12.76□□□□□ -0.37
Trim60Q8VI40 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim60Q8VI40 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm11597-201ENSMUST00000121423 964 ntBASIC12.75□□□□□ -0.37
Trim60Q8VI40 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim60Q8VI40 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms