Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.3□□□□□ -0.6
Nkd2Q8VE28 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.3□□□□□ -0.6
Nkd2Q8VE28 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkd2Q8VE28 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Mir5132-201ENSMUST00000175166 71 ntBASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Gm6458-201ENSMUST00000211573 635 ntBASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd2Q8VE28 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd2Q8VE28 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms