Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SynpoQ8CC35 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm15808-201ENSMUST00000119046 604 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm25668-201ENSMUST00000157700 129 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm37259-201ENSMUST00000193903 849 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm8099-201ENSMUST00000200510 742 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm18056-201ENSMUST00000207670 568 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm18061-201ENSMUST00000208350 562 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm18063-201ENSMUST00000208529 568 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gm18052-201ENSMUST00000208750 559 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.98□□□□□ -0.49
SynpoQ8CC35 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SynpoQ8CC35 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.97□□□□□ -0.49
SynpoQ8CC35 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm15236-201ENSMUST00000117309 379 ntBASIC11.97□□□□□ -0.49
SynpoQ8CC35 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm22121-201ENSMUST00000175148 54 ntBASIC11.97□□□□□ -0.49
SynpoQ8CC35 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.97□□□□□ -0.49
SynpoQ8CC35 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm32025-201ENSMUST00000217960 307 ntBASIC11.97□□□□□ -0.49
SynpoQ8CC35 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.97□□□□□ -0.49
SynpoQ8CC35 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SynpoQ8CC35 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms