Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Gm43186-201ENSMUST00000198130 824 ntBASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Gm25517-201ENSMUST00000083865 134 ntBASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx55Q6ZPL9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm10152-201ENSMUST00000193475 1344 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm23912-201ENSMUST00000104687 87 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm12579-201ENSMUST00000118040 783 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm1848-201ENSMUST00000120711 789 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm12516-201ENSMUST00000120819 385 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm14247-201ENSMUST00000120950 237 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm8815-201ENSMUST00000173809 620 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm37028-201ENSMUST00000194276 107 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm6430-201ENSMUST00000054664 1248 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm3052-202ENSMUST00000188254 2224 ntBASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx55Q6ZPL9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm8731-201ENSMUST00000118088 412 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm6485-201ENSMUST00000160676 439 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm18893-201ENSMUST00000198416 943 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx55Q6ZPL9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms