Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Gm270-201ENSMUST00000223010 976 ntBASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc85bQ6PDY0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc85bQ6PDY0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc85bQ6PDY0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm13937-201ENSMUST00000121000 988 ntBASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm17831-201ENSMUST00000205579 900 ntBASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm807-202ENSMUST00000224929 408 ntBASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc85bQ6PDY0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Gm6485-201ENSMUST00000160676 439 ntBASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Gm28196-201ENSMUST00000187719 640 ntBASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Gm44329-201ENSMUST00000197469 112 ntBASIC12.88□□□□□ -0.35
Ccdc85bQ6PDY0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms