Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Gm24526-201ENSMUST00000082921 158 ntBASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smarcd3Q6P9Z1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm8652-201ENSMUST00000181363 964 ntBASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm5745-201ENSMUST00000183748 313 ntBASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm27892-201ENSMUST00000185017 106 ntBASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm32025-201ENSMUST00000217960 307 ntBASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Map1b-203ENSMUST00000223725 2669 ntBASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smarcd3Q6P9Z1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm12363-201ENSMUST00000122250 668 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm22331-201ENSMUST00000158066 136 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm4271-201ENSMUST00000174444 973 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm29705-201ENSMUST00000212598 474 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm8227-201ENSMUST00000223306 571 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smarcd3Q6P9Z1 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms