Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.38□□□□□ -0.59
AtmQ62388 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.38□□□□□ -0.59
AtmQ62388 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
AtmQ62388 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.38□□□□□ -0.59
AtmQ62388 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.38□□□□□ -0.59
AtmQ62388 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.38□□□□□ -0.59
AtmQ62388 Gm12684-201ENSMUST00000118675 999 ntBASIC11.38□□□□□ -0.59
AtmQ62388 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.38□□□□□ -0.59
AtmQ62388 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.38□□□□□ -0.59
AtmQ62388 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
AtmQ62388 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
AtmQ62388 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.38□□□□□ -0.59
AtmQ62388 Gm24078-201ENSMUST00000158184 103 ntBASIC11.38□□□□□ -0.59
AtmQ62388 Gm37981-201ENSMUST00000194280 535 ntBASIC11.38□□□□□ -0.59
AtmQ62388 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
AtmQ62388 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
AtmQ62388 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AtmQ62388 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
AtmQ62388 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.37□□□□□ -0.59
AtmQ62388 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Gm11244-201ENSMUST00000121243 237 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Gm22846-201ENSMUST00000157706 270 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Gm8815-201ENSMUST00000173809 620 ntBASIC11.37□□□□□ -0.59
AtmQ62388 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Gm3726-201ENSMUST00000203110 785 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.37□□□□□ -0.59
AtmQ62388 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
AtmQ62388 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.37□□□□□ -0.59
AtmQ62388 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
AtmQ62388 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Gm12791-201ENSMUST00000120788 655 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.37□□□□□ -0.59
AtmQ62388 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.37□□□□□ -0.59
AtmQ62388 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
AtmQ62388 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.37□□□□□ -0.59
AtmQ62388 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.37□□□□□ -0.59
AtmQ62388 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
AtmQ62388 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
AtmQ62388 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AtmQ62388 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms