Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Mir6420-201ENSMUST00000185032 102 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm6334-201ENSMUST00000207083 228 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.06□□□□□ -0.48
Vsx2Q61412 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Cog3-203ENSMUST00000227473 4197 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Daam2-202ENSMUST00000224595 1926 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm14723-201ENSMUST00000118686 215 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm7046-201ENSMUST00000221351 977 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.05□□□□□ -0.48
Vsx2Q61412 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vsx2Q61412 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx2Q61412 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.04□□□□□ -0.48
Vsx2Q61412 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm13297-201ENSMUST00000120205 934 ntBASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms