Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Gm10434-201ENSMUST00000101158 471 ntBASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Gm12058-201ENSMUST00000118614 437 ntBASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim38Q5SZ99 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm4034-201ENSMUST00000187674 480 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm39404-201ENSMUST00000216350 313 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.82□□□□□ -0.36
Trim38Q5SZ99 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim38Q5SZ99 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms