Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Gm15707-201ENSMUST00000118804 996 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Gm22388-201ENSMUST00000158194 248 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Gm9625-201ENSMUST00000180422 955 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Gm38151-201ENSMUST00000195085 289 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Gm44506-201ENSMUST00000206278 965 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Vps13aQ5H8C4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.9□□□□□ -0.51
Vps13aQ5H8C4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps13aQ5H8C4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.9□□□□□ -0.51
Vps13aQ5H8C4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.9□□□□□ -0.51
Vps13aQ5H8C4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Vps13aQ5H8C4 Dapk1-207ENSMUST00000226059 5009 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Mir1905-201ENSMUST00000122779 82 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm45094-201ENSMUST00000207013 617 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm7082-201ENSMUST00000209880 969 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm10263-201ENSMUST00000085163 300 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm13445-201ENSMUST00000121664 307 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps13aQ5H8C4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gm23612-201ENSMUST00000103823 110 ntBASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gm23576-201ENSMUST00000179918 110 ntBASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mir7221-201ENSMUST00000184009 72 ntBASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 Gm28833-201ENSMUST00000189671 559 ntBASIC11.88□□□□□ -0.51
Vps13aQ5H8C4 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms