Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Gm10312-201ENSMUST00000078515 489 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Gm12015-201ENSMUST00000117065 843 ntBASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Gm44882-201ENSMUST00000205702 802 ntBASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nlrc4Q3UP24 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13□□□□□ -0.33
Nlrc4Q3UP24 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm26083-201ENSMUST00000157904 193 ntBASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm38317-201ENSMUST00000195564 343 ntBASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Dhrs4-202ENSMUST00000226168 828 ntBASIC13□□□□□ -0.33
Nlrc4Q3UP24 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm9996-201ENSMUST00000070359 913 ntBASIC13□□□□□ -0.33
Nlrc4Q3UP24 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13□□□□□ -0.33
Nlrc4Q3UP24 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nlrc4Q3UP24 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nlrc4Q3UP24 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nlrc4Q3UP24 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nlrc4Q3UP24 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nlrc4Q3UP24 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nlrc4Q3UP24 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms