Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm25053-201ENSMUST00000103982 133 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm25922-201ENSMUST00000104281 130 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm22379-201ENSMUST00000157480 131 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm24679-201ENSMUST00000158762 111 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm25053-202ENSMUST00000199731 132 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm8574-201ENSMUST00000203207 924 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Gm18561-201ENSMUST00000206027 804 ntBASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vars2Q3U2A8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm22594-201ENSMUST00000104251 130 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Mir6941-201ENSMUST00000184711 59 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm18801-201ENSMUST00000186616 536 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm42511-201ENSMUST00000196160 234 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm6423-201ENSMUST00000204315 934 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vars2Q3U2A8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm14993-201ENSMUST00000121180 164 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm8436-201ENSMUST00000210152 1080 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm5749-201ENSMUST00000210673 1090 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms