Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm2231-201ENSMUST00000125661 612 ntBASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm27331-201ENSMUST00000183705 60 ntBASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43aQ3TL54 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.09□□□□□ -0.31
Trim43aQ3TL54 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Gm27847-201ENSMUST00000183711 107 ntBASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Gm27375-201ENSMUST00000183799 107 ntBASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43aQ3TL54 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.08□□□□□ -0.31
Trim43aQ3TL54 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.08□□□□□ -0.31
Trim43aQ3TL54 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43aQ3TL54 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms