Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm39404-201ENSMUST00000216350 313 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cul4aQ3TCH7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gm8738-201ENSMUST00000172606 329 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gm6222-202ENSMUST00000182143 629 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.94□□□□□ -0.34
Cul4aQ3TCH7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm24830-201ENSMUST00000102024 166 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm3890-201ENSMUST00000182416 207 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm26232-201ENSMUST00000083360 166 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cul4aQ3TCH7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms