Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox4Q06831 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox4Q06831 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox4Q06831 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox4Q06831 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.16□□□□□ -0.46
Sox4Q06831 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sox4Q06831 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox4Q06831 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm24934-201ENSMUST00000103764 111 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm8885-201ENSMUST00000189382 598 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 Gm38241-201ENSMUST00000192641 898 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Gm9257-201ENSMUST00000221254 232 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.15□□□□□ -0.46
Sox4Q06831 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.15□□□□□ -0.46
Sox4Q06831 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Sox4Q06831 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox4Q06831 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox4Q06831 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Sox4Q06831 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox4Q06831 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.14□□□□□ -0.47
Sox4Q06831 Paupar-201ENSMUST00000194826 3482 ntBASIC12.14□□□□□ -0.47
Sox4Q06831 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.14□□□□□ -0.47
Sox4Q06831 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Gm44967-201ENSMUST00000207047 631 ntBASIC12.14□□□□□ -0.47
Sox4Q06831 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox4Q06831 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox4Q06831 Gzmn-202ENSMUST00000225535 989 ntBASIC12.14□□□□□ -0.47
Sox4Q06831 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.14□□□□□ -0.47
Sox4Q06831 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox4Q06831 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms