Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.59□□□□□ -0.39
Thumpd3P97770 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thumpd3P97770 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thumpd3P97770 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thumpd3P97770 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thumpd3P97770 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Thumpd3P97770 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Mir1247-201ENSMUST00000116706 82 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.58□□□□□ -0.4
Thumpd3P97770 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Gm19184-201ENSMUST00000196798 928 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Gm43179-201ENSMUST00000198797 275 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.58□□□□□ -0.4
Thumpd3P97770 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thumpd3P97770 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Thumpd3P97770 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.57□□□□□ -0.4
Thumpd3P97770 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm37008-201ENSMUST00000195712 319 ntBASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm37497-201ENSMUST00000195830 798 ntBASIC12.57□□□□□ -0.4
Thumpd3P97770 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm18054-201ENSMUST00000207539 555 ntBASIC12.57□□□□□ -0.4
Thumpd3P97770 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.57□□□□□ -0.4
Thumpd3P97770 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Gm10146-201ENSMUST00000072739 309 ntBASIC12.57□□□□□ -0.4
Thumpd3P97770 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Thumpd3P97770 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thumpd3P97770 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms