Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.56□□□□□ -0.24
Lig3P97386 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.56□□□□□ -0.24
Lig3P97386 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.56□□□□□ -0.24
Lig3P97386 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lig3P97386 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lig3P97386 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.56□□□□□ -0.24
Lig3P97386 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Lig3P97386 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lig3P97386 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lig3P97386 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Mir874-201ENSMUST00000104769 76 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Gm9083-201ENSMUST00000120423 819 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Gm13665-201ENSMUST00000120830 528 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.55□□□□□ -0.24
Lig3P97386 Gm8738-201ENSMUST00000172606 329 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.55□□□□□ -0.24
Lig3P97386 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.55□□□□□ -0.24
Lig3P97386 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.55□□□□□ -0.24
Lig3P97386 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.55□□□□□ -0.24
Lig3P97386 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
Lig3P97386 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lig3P97386 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.55□□□□□ -0.24
Lig3P97386 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lig3P97386 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.55□□□□□ -0.24
Lig3P97386 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lig3P97386 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.54□□□□□ -0.24
Lig3P97386 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lig3P97386 Gm23270-201ENSMUST00000104055 131 ntBASIC13.54□□□□□ -0.24
Lig3P97386 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Mir1943-201ENSMUST00000158276 73 ntBASIC13.54□□□□□ -0.24
Lig3P97386 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.54□□□□□ -0.24
Lig3P97386 AA914427-201ENSMUST00000193194 1166 ntBASIC13.54□□□□□ -0.24
Lig3P97386 Gm37835-201ENSMUST00000193305 361 ntBASIC13.54□□□□□ -0.24
Lig3P97386 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.54□□□□□ -0.24
Lig3P97386 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.54□□□□□ -0.24
Lig3P97386 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.54□□□□□ -0.24
Lig3P97386 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lig3P97386 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lig3P97386 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lig3P97386 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.53□□□□□ -0.24
Lig3P97386 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms