Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43cP86449 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm22323-201ENSMUST00000103832 109 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim43cP86449 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm8885-201ENSMUST00000189382 598 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Gm37489-201ENSMUST00000191883 159 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim43cP86449 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm30285-201ENSMUST00000214614 422 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm9899-201ENSMUST00000065519 555 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43cP86449 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43cP86449 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trim43cP86449 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim43cP86449 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim43cP86449 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim43cP86449 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.42□□□□□ -0.26
Trim43cP86449 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.42□□□□□ -0.26
Trim43cP86449 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Gm24934-201ENSMUST00000103764 111 ntBASIC13.42□□□□□ -0.26
Trim43cP86449 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Trim43cP86449 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Trim43cP86449 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim43cP86449 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim43cP86449 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Gm11222-201ENSMUST00000119005 738 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Gm42599-201ENSMUST00000201308 469 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Gm9368-201ENSMUST00000219348 831 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Cts7-204ENSMUST00000225321 1257 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms