Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.05□□□□□ -0.64
SgcbP82349 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm12314-201ENSMUST00000118104 538 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm14363-201ENSMUST00000122304 409 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm18351-201ENSMUST00000188646 883 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.05□□□□□ -0.64
SgcbP82349 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.05□□□□□ -0.64
SgcbP82349 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SgcbP82349 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Gm24255-201ENSMUST00000104481 128 ntBASIC11.04□□□□□ -0.64
SgcbP82349 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SgcbP82349 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.04□□□□□ -0.64
SgcbP82349 Gm13366-201ENSMUST00000122198 970 ntBASIC11.04□□□□□ -0.64
SgcbP82349 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Gm3096-201ENSMUST00000185770 364 ntBASIC11.04□□□□□ -0.64
SgcbP82349 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.04□□□□□ -0.64
SgcbP82349 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.04□□□□□ -0.64
SgcbP82349 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.04□□□□□ -0.64
SgcbP82349 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SgcbP82349 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcbP82349 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms